Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nubp2Q9R061 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Gm9385-201ENSMUST00000117563 472 ntBASIC12.77□□□□□ -0.37
Nubp2Q9R061 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Rpph1-201ENSMUST00000175096 319 ntBASIC12.77□□□□□ -0.37
Nubp2Q9R061 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nubp2Q9R061 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Gm14701-201ENSMUST00000117156 348 ntBASIC12.76□□□□□ -0.37
Nubp2Q9R061 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Rprl2-201ENSMUST00000157150 290 ntBASIC12.76□□□□□ -0.37
Nubp2Q9R061 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Gm8396-201ENSMUST00000057361 823 ntBASIC12.76□□□□□ -0.37
Nubp2Q9R061 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.76□□□□□ -0.37
Nubp2Q9R061 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.76□□□□□ -0.37
Nubp2Q9R061 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nubp2Q9R061 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gm20553-201ENSMUST00000204205 844 ntBASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.75□□□□□ -0.37
Nubp2Q9R061 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Nubp2Q9R061 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms