Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gm23931-201ENSMUST00000103842 109 ntBASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gm4857-201ENSMUST00000192718 785 ntBASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gm43818-201ENSMUST00000200605 466 ntBASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gm18054-201ENSMUST00000207539 555 ntBASIC11.47□□□□□ -0.57
Crlf1Q9JM58 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf1Q9JM58 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm38266-201ENSMUST00000194931 421 ntBASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crlf1Q9JM58 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crlf1Q9JM58 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Gm45880-201ENSMUST00000213041 853 ntBASIC11.45□□□□□ -0.58
Crlf1Q9JM58 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crlf1Q9JM58 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms