Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3bQ9ES34 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm12134-201ENSMUST00000122109 520 ntBASIC17.02■□□□□ 0.32
Ube3bQ9ES34 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm9522-201ENSMUST00000182394 926 ntBASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm7063-201ENSMUST00000186840 981 ntBASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Gm20445-201ENSMUST00000061905 565 ntBASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3bQ9ES34 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.02■□□□□ 0.31
Ube3bQ9ES34 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.02■□□□□ 0.31
Ube3bQ9ES34 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.02■□□□□ 0.31
Ube3bQ9ES34 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3bQ9ES34 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ube3bQ9ES34 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17■□□□□ 0.31
Ube3bQ9ES34 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17■□□□□ 0.31
Ube3bQ9ES34 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Gm21854-201ENSMUST00000179901 471 ntBASIC17■□□□□ 0.31
Ube3bQ9ES34 Gm21470-201ENSMUST00000187680 696 ntBASIC17■□□□□ 0.31
Ube3bQ9ES34 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17■□□□□ 0.31
Ube3bQ9ES34 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Gm44855-201ENSMUST00000205725 362 ntBASIC17■□□□□ 0.31
Ube3bQ9ES34 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17■□□□□ 0.31
Ube3bQ9ES34 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17■□□□□ 0.31
Ube3bQ9ES34 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3bQ9ES34 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms