Protein–RNA interactions for Protein: Q9EPL2

Clstn1, Calsyntenin-1, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1Q9EPL2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clstn1Q9EPL2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clstn1Q9EPL2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gm27430-201ENSMUST00000184585 107 ntBASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gm44333-201ENSMUST00000197168 107 ntBASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.05■□□□□ 0.32
Clstn1Q9EPL2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm22065-201ENSMUST00000103753 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm22066-201ENSMUST00000103761 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24932-201ENSMUST00000103763 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24115-201ENSMUST00000103799 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm22190-201ENSMUST00000103827 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm22191-201ENSMUST00000103831 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24721-201ENSMUST00000103849 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm28018-201ENSMUST00000103869 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm26399-201ENSMUST00000103937 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm25349-201ENSMUST00000177728 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm23616-201ENSMUST00000177797 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm25871-201ENSMUST00000177816 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24752-201ENSMUST00000178240 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24496-201ENSMUST00000178287 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm25649-201ENSMUST00000178476 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm25548-201ENSMUST00000178681 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm23147-201ENSMUST00000178841 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm26095-201ENSMUST00000179270 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm22171-201ENSMUST00000179283 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm23936-201ENSMUST00000179354 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm22619-201ENSMUST00000179516 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm25255-201ENSMUST00000179579 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24755-201ENSMUST00000179691 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm26506-201ENSMUST00000179692 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm25086-201ENSMUST00000179931 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm23243-201ENSMUST00000180047 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24659-201ENSMUST00000180212 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm24169-201ENSMUST00000180244 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm23689-201ENSMUST00000180354 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm27359-201ENSMUST00000184153 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm27785-201ENSMUST00000184268 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm27466-201ENSMUST00000184396 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm27703-201ENSMUST00000184836 110 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Gm45098-201ENSMUST00000207179 657 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clstn1Q9EPL2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms