Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.02□□□□□ -0.16
Rrp8Q9DB85 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Gm17150-201ENSMUST00000165577 381 ntBASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rrp8Q9DB85 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Gm4984-201ENSMUST00000115987 360 ntBASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Mir7085-201ENSMUST00000184353 66 ntBASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp8Q9DB85 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp8Q9DB85 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms