Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Gm2451-201ENSMUST00000199447 999 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Gm10290-201ENSMUST00000200451 999 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Thap2-203ENSMUST00000218989 527 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Psmb5-202ENSMUST00000227257 622 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.19■□□□□ 0.34
Chmp4cQ9D7F7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Gm15483-201ENSMUST00000120338 456 ntBASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp4cQ9D7F7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Gm8749-201ENSMUST00000117737 331 ntBASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp4cQ9D7F7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms