Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Gm18489-201ENSMUST00000172565 551 ntBASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim42Q9D2H5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gm27646-201ENSMUST00000183989 110 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gm6296-201ENSMUST00000222599 943 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim42Q9D2H5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms