Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lysmd1Q9D0E3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.15■□□□□ 0.02
Lysmd1Q9D0E3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd1Q9D0E3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd1Q9D0E3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd1Q9D0E3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd1Q9D0E3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Gm44967-201ENSMUST00000207047 631 ntBASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Gm10146-201ENSMUST00000072739 309 ntBASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd1Q9D0E3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Gm14208-201ENSMUST00000119645 678 ntBASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Itm2b-204ENSMUST00000228637 783 ntBASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Lysmd1Q9D0E3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm14726-201ENSMUST00000120623 896 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm24420-201ENSMUST00000176676 59 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm9211-201ENSMUST00000182882 975 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.12■□□□□ 0.01
Lysmd1Q9D0E3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.11■□□□□ 0.01
Lysmd1Q9D0E3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms