Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Gm27628-201ENSMUST00000184911 107 ntBASIC15.62■□□□□ 0.09
Ssr1Q9CY50 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ssr1Q9CY50 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Gm23547-201ENSMUST00000158210 271 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Gm27300-201ENSMUST00000184085 97 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Gm27335-201ENSMUST00000184758 97 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ssr1Q9CY50 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.6■□□□□ 0.09
Ssr1Q9CY50 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Mir5126-201ENSMUST00000175513 77 ntBASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ssr1Q9CY50 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms