Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Gm5356-201ENSMUST00000093326 615 ntBASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 AY702102-202ENSMUST00000194651 1173 ntBASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Nip7Q9CXK8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Gm37714-201ENSMUST00000194742 342 ntBASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Carlr-201ENSMUST00000181515 2574 ntBASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nip7Q9CXK8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Gm15240-201ENSMUST00000118156 720 ntBASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Gm43630-201ENSMUST00000201550 776 ntBASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nip7Q9CXK8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nip7Q9CXK8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Mir1938-201ENSMUST00000158746 100 ntBASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Gm6244-201ENSMUST00000178732 841 ntBASIC17.76■□□□□ 0.43
Nip7Q9CXK8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.76■□□□□ 0.43
Nip7Q9CXK8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms