Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Q9CQM1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Q9CQM1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Q9CQM1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.37□□□□□ -0.27
Q9CQM1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.37□□□□□ -0.27
Q9CQM1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.37□□□□□ -0.27
Q9CQM1 Mir7070-201ENSMUST00000183657 86 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Gm27772-201ENSMUST00000184900 187 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Gm18935-201ENSMUST00000212692 664 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Gm8598-201ENSMUST00000221184 836 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Cts7-204ENSMUST00000225321 1257 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Q9CQM1 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.37□□□□□ -0.27
Q9CQM1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Q9CQM1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q9CQM1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Q9CQM1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.36□□□□□ -0.27
Q9CQM1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.36□□□□□ -0.27
Q9CQM1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Gm24420-201ENSMUST00000176676 59 ntBASIC13.36□□□□□ -0.27
Q9CQM1 Gm8927-201ENSMUST00000181978 981 ntBASIC13.36□□□□□ -0.27
Q9CQM1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.36□□□□□ -0.27
Q9CQM1 Gm9368-201ENSMUST00000219348 831 ntBASIC13.36□□□□□ -0.27
Q9CQM1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Gm3222-201ENSMUST00000071282 990 ntBASIC13.36□□□□□ -0.27
Q9CQM1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.36□□□□□ -0.27
Q9CQM1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Q9CQM1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Q9CQM1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.36□□□□□ -0.27
Q9CQM1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Q9CQM1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q9CQM1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Q9CQM1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.35□□□□□ -0.27
Q9CQM1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.35□□□□□ -0.27
Q9CQM1 Proscos-202ENSMUST00000178990 666 ntBASIC13.35□□□□□ -0.27
Q9CQM1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.35□□□□□ -0.27
Q9CQM1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Q9CQM1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Q9CQM1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Q9CQM1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q9CQM1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms