Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm16026-204ENSMUST00000162652 683 ntBASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3bQ9CQE1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm2272-201ENSMUST00000194903 582 ntBASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm2651-201ENSMUST00000203560 838 ntBASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Thap2-203ENSMUST00000218989 527 ntBASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3bQ9CQE1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms