Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Gm10275-202ENSMUST00000168697 495 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Gm7461-201ENSMUST00000058918 827 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Gm10275-201ENSMUST00000092620 635 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb1Q9CQ70 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gm15483-201ENSMUST00000120338 456 ntBASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gm11543-201ENSMUST00000120758 370 ntBASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Rpph1-201ENSMUST00000175096 319 ntBASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gm27920-201ENSMUST00000183953 96 ntBASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.74□□□□□ -0.53
H2afb1Q9CQ70 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms