Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim8Q99PJ2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim8Q99PJ2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trim8Q99PJ2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.08□□□□□ -0.15
Trim8Q99PJ2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim8Q99PJ2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Gm7862-201ENSMUST00000121461 292 ntBASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Gm18733-201ENSMUST00000173950 856 ntBASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim8Q99PJ2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim8Q99PJ2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms