Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2ird2Q99NI3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2ird2Q99NI3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Gm13453-201ENSMUST00000118708 357 ntBASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Gtf2ird2Q99NI3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2ird2Q99NI3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gtf2ird2Q99NI3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gtf2ird2Q99NI3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gtf2ird2Q99NI3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gtf2ird2Q99NI3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gtf2ird2Q99NI3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms