Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd1Q99J36 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44357-201ENSMUST00000195897 142 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm19658-201ENSMUST00000196231 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44367-201ENSMUST00000196836 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44350-201ENSMUST00000197197 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44390-201ENSMUST00000197533 144 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44313-201ENSMUST00000198018 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44486-201ENSMUST00000198508 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44314-201ENSMUST00000199263 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44394-201ENSMUST00000199558 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44484-201ENSMUST00000199873 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44466-201ENSMUST00000200264 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm44359-201ENSMUST00000200671 138 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Gm45167-201ENSMUST00000208007 322 ntBASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd1Q99J36 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms