Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac1Q91Y10 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Gm12260-201ENSMUST00000122447 411 ntBASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Mir8117-201ENSMUST00000184773 107 ntBASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac1Q91Y10 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Gm15467-201ENSMUST00000120582 445 ntBASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac1Q91Y10 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms