Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb20Q91XZ9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Mir449b-201ENSMUST00000104833 80 ntBASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Gm37809-201ENSMUST00000195050 931 ntBASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb20Q91XZ9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Gm32999-201ENSMUST00000192693 562 ntBASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 AC126043.1-201ENSMUST00000221304 1141 ntBASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Gm10617-201ENSMUST00000098368 1172 ntBASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb20Q91XZ9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms