Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb5Q91XZ5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Gm17795-201ENSMUST00000214505 757 ntBASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb5Q91XZ5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Gm12341-201ENSMUST00000119724 503 ntBASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Gm8602-201ENSMUST00000184045 607 ntBASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Gm5279-201ENSMUST00000199575 745 ntBASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Gm25857-201ENSMUST00000082788 129 ntBASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb5Q91XZ5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms