Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Gm14822-201ENSMUST00000122247 291 ntBASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Gm43474-201ENSMUST00000196415 774 ntBASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Gm18049-201ENSMUST00000208909 581 ntBASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb6Q91XZ4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm22065-201ENSMUST00000103753 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm22066-201ENSMUST00000103761 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24932-201ENSMUST00000103763 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24115-201ENSMUST00000103799 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm22190-201ENSMUST00000103827 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm22191-201ENSMUST00000103831 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24721-201ENSMUST00000103849 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm28018-201ENSMUST00000103869 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm26399-201ENSMUST00000103937 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm25349-201ENSMUST00000177728 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm23616-201ENSMUST00000177797 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm25871-201ENSMUST00000177816 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24752-201ENSMUST00000178240 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24496-201ENSMUST00000178287 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm25649-201ENSMUST00000178476 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm25548-201ENSMUST00000178681 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm23147-201ENSMUST00000178841 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm26095-201ENSMUST00000179270 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm22171-201ENSMUST00000179283 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm23936-201ENSMUST00000179354 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm22619-201ENSMUST00000179516 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm25255-201ENSMUST00000179579 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24755-201ENSMUST00000179691 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm26506-201ENSMUST00000179692 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm25086-201ENSMUST00000179931 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm23243-201ENSMUST00000180047 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24659-201ENSMUST00000180212 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm24169-201ENSMUST00000180244 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm23689-201ENSMUST00000180354 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27359-201ENSMUST00000184153 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27785-201ENSMUST00000184268 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27466-201ENSMUST00000184396 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27703-201ENSMUST00000184836 110 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm29541-201ENSMUST00000191351 678 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms