Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.5■□□□□ 0.23
Ddx41Q91VN6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Ddx41Q91VN6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx41Q91VN6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gm17837-201ENSMUST00000186435 985 ntBASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gm28630-201ENSMUST00000187806 498 ntBASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gm18766-201ENSMUST00000189811 808 ntBASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx41Q91VN6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms