Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.74■□□□□ 0.27
StrcQ8VIM6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gm3890-201ENSMUST00000182416 207 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gm8227-201ENSMUST00000223306 571 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Mir433-201ENSMUST00000093564 124 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gm15370-201ENSMUST00000117158 253 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gm5363-201ENSMUST00000211927 938 ntBASIC16.73■□□□□ 0.27
StrcQ8VIM6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
StrcQ8VIM6 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gm16479-201ENSMUST00000121706 932 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gm27320-201ENSMUST00000184892 109 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.72■□□□□ 0.27
StrcQ8VIM6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
StrcQ8VIM6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Gm26315-201ENSMUST00000083890 321 ntBASIC16.72■□□□□ 0.27
StrcQ8VIM6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
StrcQ8VIM6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
StrcQ8VIM6 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.71■□□□□ 0.27
StrcQ8VIM6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
StrcQ8VIM6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
StrcQ8VIM6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Gm24255-201ENSMUST00000104481 128 ntBASIC16.7■□□□□ 0.26
StrcQ8VIM6 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.7■□□□□ 0.26
StrcQ8VIM6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Gm14381-201ENSMUST00000122105 414 ntBASIC16.7■□□□□ 0.26
StrcQ8VIM6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
StrcQ8VIM6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.7■□□□□ 0.26
StrcQ8VIM6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
StrcQ8VIM6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms