Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gm13597-201ENSMUST00000121239 375 ntBASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.87□□□□□ -0.03
Trim60Q8VI40 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.87□□□□□ -0.03
Trim60Q8VI40 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.87□□□□□ -0.03
Trim60Q8VI40 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim60Q8VI40 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.86□□□□□ -0.03
Trim60Q8VI40 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.86□□□□□ -0.03
Trim60Q8VI40 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim60Q8VI40 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Gm5177-201ENSMUST00000183092 997 ntBASIC14.85□□□□□ -0.03
Trim60Q8VI40 Gm27301-201ENSMUST00000184012 127 ntBASIC14.85□□□□□ -0.03
Trim60Q8VI40 Gm37230-201ENSMUST00000194491 818 ntBASIC14.85□□□□□ -0.03
Trim60Q8VI40 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.85□□□□□ -0.03
Trim60Q8VI40 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim60Q8VI40 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms