Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpa1Q8VEE4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rpa1Q8VEE4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm8749-201ENSMUST00000117737 331 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm11780-201ENSMUST00000136880 516 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpa1Q8VEE4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms