Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Gm6159-201ENSMUST00000191249 1724 ntBASIC20.18■□□□□ 0.82
Cd109Q8R422 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cd109Q8R422 Gm11425-201ENSMUST00000119608 498 ntBASIC20.18■□□□□ 0.82
Cd109Q8R422 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.18■□□□□ 0.82
Cd109Q8R422 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC20.18■□□□□ 0.82
Cd109Q8R422 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC20.18■□□□□ 0.82
Cd109Q8R422 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Cd109Q8R422 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd109Q8R422 Gm9396-201ENSMUST00000076703 567 ntBASIC20.18■□□□□ 0.82
Cd109Q8R422 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.17■□□□□ 0.82
Cd109Q8R422 Gm12390-201ENSMUST00000117897 397 ntBASIC20.17■□□□□ 0.82
Cd109Q8R422 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Gm15429-201ENSMUST00000151268 798 ntBASIC20.17■□□□□ 0.82
Cd109Q8R422 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.17■□□□□ 0.82
Cd109Q8R422 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC20.17■□□□□ 0.82
Cd109Q8R422 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 AC153962.4-201ENSMUST00000217878 242 ntBASIC20.17■□□□□ 0.82
Cd109Q8R422 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd109Q8R422 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Gm8775-201ENSMUST00000170943 1327 ntBASIC20.16■□□□□ 0.82
Cd109Q8R422 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cd109Q8R422 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cd109Q8R422 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC20.16■□□□□ 0.82
Cd109Q8R422 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Gm24420-201ENSMUST00000176676 59 ntBASIC20.16■□□□□ 0.82
Cd109Q8R422 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.16■□□□□ 0.82
Cd109Q8R422 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.16■□□□□ 0.82
Cd109Q8R422 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cd109Q8R422 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd109Q8R422 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cd109Q8R422 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 AC168058.1-201ENSMUST00000219521 2282 ntBASIC20.15■□□□□ 0.82
Cd109Q8R422 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.15■□□□□ 0.82
Cd109Q8R422 Gm21038-201ENSMUST00000222205 1383 ntBASIC20.15■□□□□ 0.82
Cd109Q8R422 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cd109Q8R422 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 Gm13689-201ENSMUST00000119360 685 ntBASIC20.15■□□□□ 0.82
Cd109Q8R422 AY702102-202ENSMUST00000194651 1173 ntBASIC20.15■□□□□ 0.82
Cd109Q8R422 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC20.15■□□□□ 0.82
Cd109Q8R422 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.15■□□□□ 0.82
Cd109Q8R422 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cd109Q8R422 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd109Q8R422 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cd109Q8R422 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cd109Q8R422 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cd109Q8R422 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cd109Q8R422 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd109Q8R422 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cd109Q8R422 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.14■□□□□ 0.81
Cd109Q8R422 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd109Q8R422 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms