Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc9Q8R1J3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Zcchc9Q8R1J3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zcchc9Q8R1J3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms