Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a1Q8K4Z5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a1Q8K4Z5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a1Q8K4Z5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a1Q8K4Z5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a1Q8K4Z5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a1Q8K4Z5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a1Q8K4Z5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Gm13616-201ENSMUST00000120600 222 ntBASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a1Q8K4Z5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Gm6415-201ENSMUST00000118488 348 ntBASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Gm12134-201ENSMUST00000122109 520 ntBASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms