Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cchcr1Q8K2I2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gm6973-201ENSMUST00000117080 721 ntBASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cchcr1Q8K2I2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Gm18737-201ENSMUST00000173594 937 ntBASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Mir3113-201ENSMUST00000175478 76 ntBASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cchcr1Q8K2I2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms