Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Gm14057-201ENSMUST00000120631 482 ntBASIC14.69□□□□□ -0.06
CopaQ8CIE6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Gm22175-201ENSMUST00000175007 78 ntBASIC14.69□□□□□ -0.06
CopaQ8CIE6 Gm7063-201ENSMUST00000186840 981 ntBASIC14.69□□□□□ -0.06
CopaQ8CIE6 Gm10253-201ENSMUST00000194270 940 ntBASIC14.69□□□□□ -0.06
CopaQ8CIE6 Gm7774-201ENSMUST00000200064 533 ntBASIC14.69□□□□□ -0.06
CopaQ8CIE6 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.69□□□□□ -0.06
CopaQ8CIE6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Gm24158-201ENSMUST00000175263 71 ntBASIC14.68□□□□□ -0.06
CopaQ8CIE6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CopaQ8CIE6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.67□□□□□ -0.06
CopaQ8CIE6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.67□□□□□ -0.06
CopaQ8CIE6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CopaQ8CIE6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms