Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.74■□□□□ 0.43
Smc5Q8CG46 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Rpph1-201ENSMUST00000175096 319 ntBASIC17.74■□□□□ 0.43
Smc5Q8CG46 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm27920-201ENSMUST00000183953 96 ntBASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.74■□□□□ 0.43
Smc5Q8CG46 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.74■□□□□ 0.43
Smc5Q8CG46 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc5Q8CG46 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.73■□□□□ 0.43
Smc5Q8CG46 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc5Q8CG46 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.72■□□□□ 0.43
Smc5Q8CG46 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.72■□□□□ 0.43
Smc5Q8CG46 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.72■□□□□ 0.43
Smc5Q8CG46 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Gm18195-201ENSMUST00000207604 706 ntBASIC17.72■□□□□ 0.43
Smc5Q8CG46 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.72■□□□□ 0.43
Smc5Q8CG46 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc5Q8CG46 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms