Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Gm13616-201ENSMUST00000120600 222 ntBASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Gm22175-201ENSMUST00000175007 78 ntBASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Gm38294-201ENSMUST00000192831 381 ntBASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Shd-206ENSMUST00000225145 998 ntBASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp44Q8C2S0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp44Q8C2S0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.78■□□□□ 0.28
Usp44Q8C2S0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp44Q8C2S0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms