Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Gm18206-201ENSMUST00000207027 926 ntBASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc40Q8BI79 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gm9726-201ENSMUST00000180321 678 ntBASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gm6944-201ENSMUST00000182449 1006 ntBASIC15□□□□□ -0.01
Ccdc40Q8BI79 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gm44945-201ENSMUST00000206764 1187 ntBASIC15□□□□□ -0.01
Ccdc40Q8BI79 AC174742.1-201ENSMUST00000218272 304 ntBASIC15□□□□□ -0.01
Ccdc40Q8BI79 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc40Q8BI79 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc40Q8BI79 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms