Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Gm4899-201ENSMUST00000178708 719 ntBASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Rps4l-201ENSMUST00000071745 943 ntBASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bQ80YF6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.15□□□□□ -0.46
Upk3bQ80YF6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bQ80YF6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3bQ80YF6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3bQ80YF6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3bQ80YF6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3bQ80YF6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Gm8584-201ENSMUST00000171982 758 ntBASIC12.14□□□□□ -0.47
Upk3bQ80YF6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms