Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Gm9719-201ENSMUST00000162765 543 ntBASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Prpf40bQ80W14 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gm22189-201ENSMUST00000103822 86 ntBASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gm5566-201ENSMUST00000116118 459 ntBASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gm17150-201ENSMUST00000165577 381 ntBASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gm37917-201ENSMUST00000194711 392 ntBASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf40bQ80W14 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Celf4-206ENSMUST00000224553 1729 ntBASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Gm11918-201ENSMUST00000121660 179 ntBASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Mir1897-201ENSMUST00000122581 272 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms