Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Gm15823-201ENSMUST00000064305 670 ntBASIC15.06■□□□□ 0
Prpf38bQ80SY5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.05■□□□□ 0
Prpf38bQ80SY5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38bQ80SY5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Gm12091-201ENSMUST00000146791 830 ntBASIC15.05■□□□□ -0
Prpf38bQ80SY5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.05■□□□□ -0
Prpf38bQ80SY5 Gm9908-201ENSMUST00000211534 448 ntBASIC15.05■□□□□ -0
Prpf38bQ80SY5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Gm6218-201ENSMUST00000219812 628 ntBASIC15.05■□□□□ -0
Prpf38bQ80SY5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38bQ80SY5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Gm45668-201ENSMUST00000211271 493 ntBASIC15.04■□□□□ -0
Prpf38bQ80SY5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38bQ80SY5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms