Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Gm2423-201ENSMUST00000074863 733 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubfd1Q78JW9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm7488-201ENSMUST00000117148 684 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm15321-201ENSMUST00000121290 288 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubfd1Q78JW9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubfd1Q78JW9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms