Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Mir1247-201ENSMUST00000116706 82 ntBASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Gm13689-201ENSMUST00000119360 685 ntBASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Gm13385-201ENSMUST00000121089 220 ntBASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx55Q6ZPL9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx55Q6ZPL9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Gm15198-201ENSMUST00000117283 177 ntBASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Gm10012-201ENSMUST00000078252 192 ntBASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.21■□□□□ 0.19
Ddx55Q6ZPL9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms