Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Gm13392-201ENSMUST00000117708 150 ntBASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snrnp40Q6PE01 Sybu-209ENSMUST00000228639 4113 ntBASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm8062-201ENSMUST00000139696 444 ntBASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm45784-201ENSMUST00000188360 142 ntBASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm2495-201ENSMUST00000191160 466 ntBASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snrnp40Q6PE01 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms