Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Gm38225-201ENSMUST00000194001 393 ntBASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcc2Q6PDG5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Gm24158-201ENSMUST00000175263 71 ntBASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Gm7774-201ENSMUST00000200064 533 ntBASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcc2Q6PDG5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22065-201ENSMUST00000103753 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22066-201ENSMUST00000103761 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24932-201ENSMUST00000103763 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24115-201ENSMUST00000103799 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22190-201ENSMUST00000103827 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22191-201ENSMUST00000103831 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25287-201ENSMUST00000103846 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24721-201ENSMUST00000103849 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22918-201ENSMUST00000103855 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm28018-201ENSMUST00000103869 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm26399-201ENSMUST00000103937 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm13616-201ENSMUST00000120600 222 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25349-201ENSMUST00000177728 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm23616-201ENSMUST00000177797 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25871-201ENSMUST00000177816 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24752-201ENSMUST00000178240 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24496-201ENSMUST00000178287 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25649-201ENSMUST00000178476 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25548-201ENSMUST00000178681 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm23147-201ENSMUST00000178841 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm26095-201ENSMUST00000179270 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22171-201ENSMUST00000179283 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm23936-201ENSMUST00000179354 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm22619-201ENSMUST00000179516 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25255-201ENSMUST00000179579 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24755-201ENSMUST00000179691 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm26506-201ENSMUST00000179692 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm25086-201ENSMUST00000179931 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm23243-201ENSMUST00000180047 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24659-201ENSMUST00000180212 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm24169-201ENSMUST00000180244 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm23689-201ENSMUST00000180354 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm27359-201ENSMUST00000184153 110 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms