Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.3■□□□□ 0.04
ShbQ6PD21 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.3■□□□□ 0.04
ShbQ6PD21 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.3■□□□□ 0.04
ShbQ6PD21 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.3■□□□□ 0.04
ShbQ6PD21 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.3■□□□□ 0.04
ShbQ6PD21 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ShbQ6PD21 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ShbQ6PD21 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
ShbQ6PD21 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.29■□□□□ 0.04
ShbQ6PD21 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.29■□□□□ 0.04
ShbQ6PD21 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm25927-201ENSMUST00000175058 117 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm27320-201ENSMUST00000184892 109 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Itm2b-204ENSMUST00000228637 783 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ShbQ6PD21 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Prob1-201ENSMUST00000097619 3021 ntBASIC15.29■□□□□ 0.04
ShbQ6PD21 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShbQ6PD21 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.28■□□□□ 0.04
ShbQ6PD21 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Gm17376-201ENSMUST00000166016 84 ntBASIC15.28■□□□□ 0.04
ShbQ6PD21 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Gm2383-201ENSMUST00000181461 807 ntBASIC15.28■□□□□ 0.04
ShbQ6PD21 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.28■□□□□ 0.04
ShbQ6PD21 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ShbQ6PD21 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShbQ6PD21 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShbQ6PD21 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShbQ6PD21 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.27■□□□□ 0.04
ShbQ6PD21 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.27■□□□□ 0.04
ShbQ6PD21 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShbQ6PD21 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ShbQ6PD21 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ShbQ6PD21 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ShbQ6PD21 Gm37497-201ENSMUST00000195830 798 ntBASIC15.27■□□□□ 0.04
ShbQ6PD21 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.27■□□□□ 0.04
ShbQ6PD21 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.27■□□□□ 0.04
ShbQ6PD21 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShbQ6PD21 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms