Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sp140Q6NSQ5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sp140Q6NSQ5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Sp140Q6NSQ5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sp140Q6NSQ5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sp140Q6NSQ5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sp140Q6NSQ5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sp140Q6NSQ5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Gm45612-201ENSMUST00000211320 160 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sp140Q6NSQ5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm11543-201ENSMUST00000120758 370 ntBASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm11745-201ENSMUST00000121669 448 ntBASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm8000-201ENSMUST00000188378 592 ntBASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm6443-201ENSMUST00000203599 874 ntBASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms