Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.13□□□□□ -0.15
VclQ64727 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VclQ64727 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VclQ64727 Carlr-201ENSMUST00000181515 2574 ntBASIC14.13□□□□□ -0.15
VclQ64727 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VclQ64727 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VclQ64727 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VclQ64727 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VclQ64727 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.12□□□□□ -0.15
VclQ64727 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Gm14042-201ENSMUST00000120139 833 ntBASIC14.12□□□□□ -0.15
VclQ64727 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.12□□□□□ -0.15
VclQ64727 AA543401-201ENSMUST00000164248 1269 ntBASIC14.12□□□□□ -0.15
VclQ64727 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VclQ64727 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.12□□□□□ -0.15
VclQ64727 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VclQ64727 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.12□□□□□ -0.15
VclQ64727 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VclQ64727 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VclQ64727 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VclQ64727 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VclQ64727 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.11□□□□□ -0.15
VclQ64727 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
VclQ64727 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Gm25144-201ENSMUST00000179561 110 ntBASIC14.11□□□□□ -0.15
VclQ64727 Gm25352-201ENSMUST00000179815 110 ntBASIC14.11□□□□□ -0.15
VclQ64727 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Gm18766-201ENSMUST00000189811 808 ntBASIC14.11□□□□□ -0.15
VclQ64727 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VclQ64727 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
VclQ64727 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.11□□□□□ -0.15
VclQ64727 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.11□□□□□ -0.15
VclQ64727 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VclQ64727 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VclQ64727 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VclQ64727 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.1□□□□□ -0.15
VclQ64727 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Gm13823-201ENSMUST00000119930 345 ntBASIC14.1□□□□□ -0.15
VclQ64727 Gm6222-201ENSMUST00000120787 396 ntBASIC14.1□□□□□ -0.15
VclQ64727 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VclQ64727 Gm9719-201ENSMUST00000162765 543 ntBASIC14.1□□□□□ -0.15
VclQ64727 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.1□□□□□ -0.15
VclQ64727 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.1□□□□□ -0.15
VclQ64727 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.1□□□□□ -0.15
VclQ64727 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VclQ64727 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VclQ64727 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms