Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.71□□□□□ -0.21
CishQ62225 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CishQ62225 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CishQ62225 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CishQ62225 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CishQ62225 Gm27622-201ENSMUST00000183779 60 ntBASIC13.71□□□□□ -0.21
CishQ62225 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.71□□□□□ -0.21
CishQ62225 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.71□□□□□ -0.21
CishQ62225 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CishQ62225 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CishQ62225 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CishQ62225 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CishQ62225 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CishQ62225 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.71□□□□□ -0.22
CishQ62225 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CishQ62225 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CishQ62225 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.7□□□□□ -0.22
CishQ62225 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.7□□□□□ -0.22
CishQ62225 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CishQ62225 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.7□□□□□ -0.22
CishQ62225 Gm12134-201ENSMUST00000122109 520 ntBASIC13.7□□□□□ -0.22
CishQ62225 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CishQ62225 Gm25144-201ENSMUST00000179561 110 ntBASIC13.7□□□□□ -0.22
CishQ62225 Gm25352-201ENSMUST00000179815 110 ntBASIC13.7□□□□□ -0.22
CishQ62225 Gm27631-201ENSMUST00000184163 466 ntBASIC13.7□□□□□ -0.22
CishQ62225 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.7□□□□□ -0.22
CishQ62225 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.7□□□□□ -0.22
CishQ62225 Gm45453-201ENSMUST00000211758 853 ntBASIC13.7□□□□□ -0.22
CishQ62225 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.7□□□□□ -0.22
CishQ62225 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CishQ62225 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
CishQ62225 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CishQ62225 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CishQ62225 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CishQ62225 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Gm24543-201ENSMUST00000103867 82 ntBASIC13.69□□□□□ -0.22
CishQ62225 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CishQ62225 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.69□□□□□ -0.22
CishQ62225 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.69□□□□□ -0.22
CishQ62225 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.69□□□□□ -0.22
CishQ62225 AA619741-201ENSMUST00000195095 646 ntBASIC13.69□□□□□ -0.22
CishQ62225 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.69□□□□□ -0.22
CishQ62225 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CishQ62225 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.69□□□□□ -0.22
CishQ62225 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CishQ62225 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CishQ62225 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.69□□□□□ -0.22
CishQ62225 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
CishQ62225 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CishQ62225 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CishQ62225 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CishQ62225 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CishQ62225 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CishQ62225 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CishQ62225 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CishQ62225 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CishQ62225 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CishQ62225 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CishQ62225 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.68□□□□□ -0.22
CishQ62225 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms