Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.94■□□□□ 0.3
Ctr9Q62018 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 BC001981-202ENSMUST00000191393 1545 ntBASIC16.93■□□□□ 0.3
Ctr9Q62018 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.93■□□□□ 0.3
Ctr9Q62018 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ctr9Q62018 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ctr9Q62018 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.93■□□□□ 0.3
Ctr9Q62018 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ctr9Q62018 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctr9Q62018 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Mir7684-201ENSMUST00000183858 60 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Gm46209-201ENSMUST00000217912 553 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.92■□□□□ 0.3
Ctr9Q62018 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.92■□□□□ 0.3
Ctr9Q62018 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctr9Q62018 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.91■□□□□ 0.3
Ctr9Q62018 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ctr9Q62018 Gm15653-201ENSMUST00000119247 907 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Gm14042-201ENSMUST00000120139 833 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Gm15487-201ENSMUST00000122373 465 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Gm43703-201ENSMUST00000200523 763 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.91■□□□□ 0.3
Ctr9Q62018 Mir125a-201ENSMUST00000083545 68 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ctr9Q62018 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctr9Q62018 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.91■□□□□ 0.3
Ctr9Q62018 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms