Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.69□□□□□ -0.22
Rai1Q61818 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Gm24644-201ENSMUST00000157114 139 ntBASIC13.69□□□□□ -0.22
Rai1Q61818 Gm27772-201ENSMUST00000184900 187 ntBASIC13.69□□□□□ -0.22
Rai1Q61818 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rai1Q61818 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rai1Q61818 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Rai1Q61818 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rai1Q61818 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.68□□□□□ -0.22
Rai1Q61818 Gm11814-201ENSMUST00000119515 929 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 Gm8652-201ENSMUST00000181363 964 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 Gm27486-201ENSMUST00000184923 80 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rai1Q61818 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rai1Q61818 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rai1Q61818 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.68□□□□□ -0.22
Rai1Q61818 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rai1Q61818 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.67□□□□□ -0.22
Rai1Q61818 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.67□□□□□ -0.22
Rai1Q61818 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rai1Q61818 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.67□□□□□ -0.22
Rai1Q61818 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rai1Q61818 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Mir1247-201ENSMUST00000116706 82 ntBASIC13.67□□□□□ -0.22
Rai1Q61818 Gm12928-201ENSMUST00000117115 573 ntBASIC13.67□□□□□ -0.22
Rai1Q61818 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.67□□□□□ -0.22
Rai1Q61818 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.67□□□□□ -0.22
Rai1Q61818 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rai1Q61818 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.67□□□□□ -0.22
Rai1Q61818 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rai1Q61818 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rai1Q61818 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rai1Q61818 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.66□□□□□ -0.22
Rai1Q61818 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.66□□□□□ -0.22
Rai1Q61818 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.66□□□□□ -0.22
Rai1Q61818 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms