Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Gli3Q61602 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.96■□□□□ 0.63
Gli3Q61602 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gli3Q61602 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Gm24447-201ENSMUST00000083977 338 ntBASIC18.96■□□□□ 0.63
Gli3Q61602 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gli3Q61602 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gli3Q61602 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gli3Q61602 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli3Q61602 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Gm18615-201ENSMUST00000222919 1031 ntBASIC18.95■□□□□ 0.62
Gli3Q61602 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli3Q61602 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.95■□□□□ 0.62
Gli3Q61602 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC18.94■□□□□ 0.62
Gli3Q61602 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC18.94■□□□□ 0.62
Gli3Q61602 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC18.94■□□□□ 0.62
Gli3Q61602 AC141438.2-201ENSMUST00000215068 271 ntBASIC18.94■□□□□ 0.62
Gli3Q61602 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.94■□□□□ 0.62
Gli3Q61602 AC135114.1-201ENSMUST00000228682 270 ntBASIC18.94■□□□□ 0.62
Gli3Q61602 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Gli3Q61602 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Gm9755-201ENSMUST00000032981 1356 ntBASIC18.94■□□□□ 0.62
Gli3Q61602 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli3Q61602 Gm20426-201ENSMUST00000173657 440 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC18.93■□□□□ 0.62
Gli3Q61602 Gm44126-201ENSMUST00000204831 514 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 CT025533.2-201ENSMUST00000228715 1248 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.93■□□□□ 0.62
Gli3Q61602 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gli3Q61602 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.93■□□□□ 0.62
Gli3Q61602 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC18.93■□□□□ 0.62
Gli3Q61602 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gli3Q61602 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gli3Q61602 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Gli3Q61602 Gm24548-201ENSMUST00000158650 108 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 Gm3508-201ENSMUST00000186012 792 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli3Q61602 AC126253.1-202ENSMUST00000226732 835 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 AC022775.2-201ENSMUST00000227885 646 ntBASIC18.93■□□□□ 0.62
Gli3Q61602 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli3Q61602 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli3Q61602 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gli3Q61602 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.92■□□□□ 0.62
Gli3Q61602 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gli3Q61602 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Gli3Q61602 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC18.92■□□□□ 0.62
Gli3Q61602 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gli3Q61602 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC18.92■□□□□ 0.62
Gli3Q61602 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Gli3Q61602 AA914427-201ENSMUST00000193194 1166 ntBASIC18.92■□□□□ 0.62
Gli3Q61602 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gli3Q61602 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC18.92■□□□□ 0.62
Gli3Q61602 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC18.92■□□□□ 0.62
Gli3Q61602 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms