Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Zic4Q61467 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Zic4Q61467 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Zic4Q61467 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Zic4Q61467 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.63□□□□□ -0.55
Zic4Q61467 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Zic4Q61467 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Zic4Q61467 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Gm12895-201ENSMUST00000122214 226 ntBASIC11.63□□□□□ -0.55
Zic4Q61467 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Zic4Q61467 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.63□□□□□ -0.55
Zic4Q61467 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Zic4Q61467 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Zic4Q61467 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Zic4Q61467 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Zic4Q61467 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.62□□□□□ -0.55
Zic4Q61467 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.62□□□□□ -0.55
Zic4Q61467 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.62□□□□□ -0.55
Zic4Q61467 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 AA414768-201ENSMUST00000121924 1257 ntBASIC11.62□□□□□ -0.55
Zic4Q61467 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.62□□□□□ -0.55
Zic4Q61467 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.62□□□□□ -0.55
Zic4Q61467 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.62□□□□□ -0.55
Zic4Q61467 Gm18246-201ENSMUST00000221023 728 ntBASIC11.62□□□□□ -0.55
Zic4Q61467 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Zic4Q61467 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.62□□□□□ -0.55
Zic4Q61467 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.62□□□□□ -0.55
Zic4Q61467 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Zic4Q61467 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Zic4Q61467 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Zic4Q61467 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms