Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.8□□□□□ -0.2
ClpbQ60649 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.8□□□□□ -0.2
ClpbQ60649 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.8□□□□□ -0.2
ClpbQ60649 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.8□□□□□ -0.2
ClpbQ60649 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.8□□□□□ -0.2
ClpbQ60649 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.8□□□□□ -0.2
ClpbQ60649 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ClpbQ60649 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.8□□□□□ -0.2
ClpbQ60649 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ClpbQ60649 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.79□□□□□ -0.2
ClpbQ60649 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ClpbQ60649 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ClpbQ60649 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.79□□□□□ -0.2
ClpbQ60649 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.79□□□□□ -0.2
ClpbQ60649 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.79□□□□□ -0.2
ClpbQ60649 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.79□□□□□ -0.2
ClpbQ60649 Gm24158-201ENSMUST00000175263 71 ntBASIC13.79□□□□□ -0.2
ClpbQ60649 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.79□□□□□ -0.2
ClpbQ60649 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.79□□□□□ -0.2
ClpbQ60649 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.79□□□□□ -0.2
ClpbQ60649 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ClpbQ60649 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.79□□□□□ -0.2
ClpbQ60649 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClpbQ60649 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ClpbQ60649 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm25287-201ENSMUST00000103846 110 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 Gm22918-201ENSMUST00000103855 110 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm8749-201ENSMUST00000117737 331 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm10576-201ENSMUST00000191927 825 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 Gm44872-201ENSMUST00000207864 420 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ClpbQ60649 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ClpbQ60649 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.78□□□□□ -0.2
ClpbQ60649 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.78□□□□□ -0.2
ClpbQ60649 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClpbQ60649 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
ClpbQ60649 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ClpbQ60649 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ClpbQ60649 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ClpbQ60649 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ClpbQ60649 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
ClpbQ60649 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ClpbQ60649 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.77□□□□□ -0.21
ClpbQ60649 Gm2810-201ENSMUST00000118681 990 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms