Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Gm29608-201ENSMUST00000190444 463 ntBASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.51■□□□□ 0.55
Mdc1Q5PSV9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mdc1Q5PSV9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm24644-201ENSMUST00000157114 139 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm8584-201ENSMUST00000171982 758 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Gm17794-201ENSMUST00000220252 955 ntBASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mdc1Q5PSV9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Gm8927-201ENSMUST00000181978 981 ntBASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Gm3222-201ENSMUST00000071282 990 ntBASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mdc1Q5PSV9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Mdc1Q5PSV9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mdc1Q5PSV9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mdc1Q5PSV9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mdc1Q5PSV9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Mdc1Q5PSV9 Gm15770-201ENSMUST00000117498 584 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms