Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.21□□□□□ -0.13
Scn2bQ56A07 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.21□□□□□ -0.13
Scn2bQ56A07 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.21□□□□□ -0.13
Scn2bQ56A07 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn2bQ56A07 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn2bQ56A07 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Scn2bQ56A07 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn2bQ56A07 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn2bQ56A07 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn2bQ56A07 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn2bQ56A07 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.2□□□□□ -0.14
Scn2bQ56A07 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn2bQ56A07 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Matn2-206ENSMUST00000228570 2798 ntBASIC14.19□□□□□ -0.14
Scn2bQ56A07 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.19□□□□□ -0.14
Scn2bQ56A07 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms